PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009767454.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 208aa    MW: 22840.2 Da    PI: 4.694
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009767454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55e-163584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r  r +lg+f t  +Aa a++a + kl+g
  XP_009767454.1 35 TYKGVRQRT-WGKWVAEIREP---N-RgPRLWLGTFETSHDAAMAYDAVAHKLYG 84
                    69****999.**********8...2.35************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.62E-283491No hitNo description
SMARTSM003808.0E-313598IPR001471AP2/ERF domain
PROSITE profilePS5103221.2193592IPR001471AP2/ERF domain
PfamPF008475.7E-113584IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-293592IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-203593IPR016177DNA-binding domain
PRINTSPR003672.5E-93647IPR001471AP2/ERF domain
PRINTSPR003672.5E-95874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MSHCSAEKKT MKISQATSRK GCMRGKGGPE NASCTYKGVR QRTWGKWVAE IREPNRGPRL  60
WLGTFETSHD AAMAYDAVAH KLYGDNAKLN FGQNSTGSSS STYSTGVPET VKMENESLFF  120
NNDFESSCYS GGQASFPLLD NKKVEEDNSD EGVGFGGMWE DLNVNLPEID DSSIWAEAKA  180
TTLFQAVNEP GMFPGNLGDG IEYPPWYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-183691359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00240DAPTransfer from AT1G75490Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767453.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
RefseqXP_009767454.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
RefseqXP_009767455.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
RefseqXP_009767456.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
RefseqXP_009767457.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
RefseqXP_009767458.11e-156PREDICTED: dehydration-responsive element-binding protein 2D-like
SwissprotQ9LQZ21e-50DRE2D_ARATH; Dehydration-responsive element-binding protein 2D
TrEMBLK4BVH03e-57K4BVH0_SOLLC; Uncharacterized protein
TrEMBLM0ZWD75e-57M0ZWD7_SOLTU; Uncharacterized protein
STRINGSolyc04g080910.1.19e-57(Solanum lycopersicum)
STRINGPGSC0003DMT4000095061e-56(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-50ERF family protein